
MCB 11 LECTURE 2: METHODS IN MICROBIOLOGY
Quiz by Vic
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Which of the following is not a factor in considering a good microscope?
TYPES OF MICROSCOPE BASED ON SOURCE
This type of microscope utilizes visible light; uses light waves and mirrors
A subtype of light microscope which has short focal length and only has 1 lens that magnifies up to 300x
A subtype of light microscope which has 2 sets of lenses which can magnify up to 1000x
This type of microscope uses electron beams as energy source. It has higher magnification and resolving power than its counterpart.
It is used for viewing objects smaller than 0.2 mm in diameter.
In a vacuum
MICROSCOPES UNDER LIGHT MICROSCOPE
MICROSCOPES UNDER LIGHT MICROSCOPE
Objects under study are darker. The microscopic field is brightly lit.
For gross morphology, e.g. Bacillus anthracis and its cerebrospinal fluid
MICROSCOPES UNDER LIGHT MICROSCOPE
Objects under study are luminous. The microscopic field is dark.
For specimens that are invisible in the ordinary light, those that cannot be stained by standard methods, and those that are distorted by staining.
MICROSCOPES UNDER LIGHT MICROSCOPE
The principle behind this is based on variations in the refractive indices (measure of bending or refracting of a beam of light on entering a denser medium)
In using this microscope, it is not necessary to fix or stain cells.
There is detailed examination of the internal structure of the specimen.
For instance, unstained epithelial cells are observed under this microscope.
MICROSCOPES UNDER LIGHT MICROSCOPE
The principle for this is based on variations in the refractive indices.
Advantage: No diffraction halo associated with phase contrast
Disadvantage: The three-dimensional appearance may not represent reality.
>No diffraction, a little bit distorted but better view of the specimen.
MICROSCOPES UNDER LIGHT MICROSCOPE
This makes use of fluorochromes.
This microscope visualizes specimens that fluoresce (glow/shine), used for the detection of immunological reactions
Fluorescence Microscope: Direct vs Indirect Immunofluorescence
MICROSCOPES UNDER LIGHT MICROSCOPE
This microscope is useful for thick specimens like biofilms. Used to visualize structures.
MICROSCOPES UNDER LIGHT MICROSCOPE
This microscope is used for examining living cells within intact tissues.
However, it is currently limited to advanced clinical and research laboratories.
MICROSCOPES UNDER ELECTRON MICROSCOPE
MICROSCOPES UNDER ELECTRON MICROSCOPE
Observing the ultrastructure in thin section of the cells
This microscope can project images in a much higher resolution up to the atomic level of thinner objects.
It is used to EXAMINE VIRUSES. Viruses caught in thin sections.
MICROSCOPES UNDER ELECTRON MICROSCOPE
Observing the surface features of viruses and cells.
This microscope REVEALS A 3-D IMAGE.
In examining microorganisms, it is advantageous to use living specimens when you are looking for motility and cellular processes.
Which is more difficult to prepare in examining microorganisms, living microorganisms or dead microorganisms?
It is advantageous for examining living microorganisms that their cells have similar refractive index in that of water
When observing microorganisms, stained specimens are already dead
ADVANTAGES AND DISADVANTAGES IN STAINED PREPARATIONS OF DEAD SPECIMENS
WHAT ARE THE 3 BASIC STEPS IN STAINING?
PROCESS OF STAINING
Smear Preparation:
PROCESS OF STAINING
_____________
Its purpose is to kill the cells and make the cells sticky. This increases the apparent diameter of the cells.
Type of Fixation by sliding the slide through the flame/direct flame or steam 2 to 3 times.
Type of Fixation which uses alcohols when the sample is "heat-sensitive". For instance, a milk sample is heat sensitive, so we use this type instead.
PROCESS OF STAINING
The application of biological dyes.
These are organic compounds carrying chromophoric ions and makes cell's internal and external structures more visible with increased contrast with the background.
Ex: Flood slide with stain; rinse and dry
3 Types of Stain
STAINING PROCEDURES: TYPES/MODES OF STAINING
STAINING PROCEDURES: TYPES/MODES OF STAINING
Uses only one dye
STAINING PROCEDURES: TYPES/MODES OF STAINING
SIMLE STAINING
Cells are stained using basic dyes which are positively charged. Cells are the same color as the dye. For instance, methylene blue for Saccharomyces cerevisiae. When you attach positive dye to negative; ATTRACTION
STAINING PROCEDURES: TYPES/MODES OF STAINING
SIMPLE STAINING
Cells are colorless or luminous. Acid fuchsin, eosin, rose bengal, india ink, nitrosin.
When you attach negative to negative dye; REPULSION
STAINING PROCEDURES: TYPES/MODES OF STAINING
Two or more dyes or reagents are used
DIFFERENTIAL STAINING: Gram Positive vs Gram Negative
STAINING PROCEDURES: TYPES/MODES OF STAINING
Type of Differential Staining where there is gram positive and gram negative depending on the cell wall
STAINING PROCEDURES: TYPES/MODES OF STAINING
Type of Differential staining wherein it is used for the diagnosis of tuberculosis. Diagnosis of mycobacterium tuberculosis responsible for tuberculosis.
STAINING PROCEDURES: TYPES/MODES OF STAINING
Two or more dyes and/or reagents are used. It differs with differential staining in its use of emphasizing a particular structure.
Examples are capsule staining, endospore staining, flagella staining (color or number of flagella/mode of motility)< and storage granule staining (metachromatic granules of Corynebacterium diphtheriae
Storage Granule Staining is for selected bacteria only since it is used as storage of energy when no energy is available. However, it is NOT PRESENT IN ALL ORGANISMS, JUST SOME.